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Categories: Ecology: Trees, Mathematics: Modeling
Published In the treetops: Ecologist studies canopy soil abundance, chemistry
(via sciencedaily.com) Original source Ecologists examined the distribution patterns of canopy soils, and their soil properties, across Costa Rican forests. The researchers suggest canopy soil may store more carbon than previously thought. Consideration of the time needed for reforestation of system with tree canopies should include the time needed for canopy mat regrowth.
Published How good is that AI-penned radiology report?
(via sciencedaily.com) New study identifies concerning gaps between how human radiologists score the accuracy of AI-generated radiology reports and how automated systems score them. Researchers designed two novel scoring systems that outperform current automated systems that evaluate the accuracy of AI narrative reports. Reliable scoring systems that accurately gauge the performance of AI models are critical for ensuring that AI continues to improve and that clinicians can trust them.
Published Deep learning for new protein design
(via sciencedaily.com) Deep learning methods have been used to augment existing energy-based physical models in 'do novo' or from-scratch computational protein design, resulting in a 10-fold increase in success rates verified in the lab for binding a designed protein with its target protein. The results will help scientists design better drugs against diseases like cancer and COVID-19.
Published Tropical trees use social distancing to maintain biodiversity
(via sciencedaily.com) Original source Tropical forests can harbor hundreds of species of trees in one square mile. Researchers reveal key factors in the spatial distribution of adult trees.
Published New method simplifies the construction process for complex materials
(via sciencedaily.com) A new technique incorporates many different building blocks of cellular metamaterials into one unified graph-based representation. This can be used to make a user-friendly interface that can quickly and easily model metamaterials, edit the structures, and simulate their properties.
Published Scientists uncover a surprising connection between number theory and evolutionary genetics
(via sciencedaily.com) An interdisciplinary team of mathematicians, engineers, physicists, and medical scientists has uncovered an unexpected link between pure mathematics and genetics, that reveals key insights into the structure of neutral mutations and the evolution of organisms.
Published Plans to plant billions of trees threatened by massive undersupply of seedlings
(via sciencedaily.com) Original source Major government and private funding is being invested in planting trees as a powerful tool to fight climate change. But new research shows a troubling bottleneck that could threaten these efforts: U.S. tree nurseries don't grow close to enough trees--nor have the species diversity needed--to meet ambitious planting and restoration goals.
Published Researchers successfully train a machine learning model in outer space for the first time
(via sciencedaily.com) Original source Scientists have trained a machine learning model in outer space, on board a satellite. This achievement could revolutionize the capabilities of remote-sensing satellites by enabling real-time monitoring and decision making for a range of applications.
Published New study reveals that tree species diversity increases spider density
(via sciencedaily.com) Original source The link between tree diversity and spider populations can help homeowners and other land managers better plan tree plantings to naturally mitigate the effects of climate change.
Published A simpler method for learning to control a robot
(via sciencedaily.com) A new machine-learning technique can efficiently learn to control a robot, leading to better performance with fewer data.
Published Research supports use of managed and prescribed fires to reduce fire severity
(via sciencedaily.com) Original source Scientists found that fires in America's dry conifer forests are burning hotter and killing more trees today than in previous centuries. The main culprit? Paradoxically, a lack of fires.
Published AI predicts the work rate of enzymes
(via sciencedaily.com) Enzymes play a key role in cellular metabolic processes. To enable the quantitative assessment of these processes, researchers need to know the so-called 'turnover number' (for short: kcat) of the enzymes. A team of bioinformaticians now describes a tool for predicting this parameter for various enzymes using AI methods.
Published Miocene period fossil forest of Wataria found in Japan
(via sciencedaily.com) Original source An exquisitely preserved fossil forest from Japan provides missing links and helps reconstruct a whole Eurasia plant from the late Miocene epoch.
Published Gene variation makes apple trees 'weep,' improving orchards
(via sciencedaily.com) Original source Plant geneticists have identified a mutation in a gene that causes the 'weeping' architecture -- branches growing downwards -- in apple trees, a finding that could improve orchard fruit production.
Published The economic life of cells
(via sciencedaily.com) A team has combined economic theory with biology to understand how natural systems respond to change. The researchers noticed a similarity between consumers' shopping behavior and the behavior of metabolic systems, which convert food into energy in our bodies. The team focused on predicting how different metabolic systems might respond to environmental change by using an economic tool called the Slutsky equation. Their calculations indicated that very different metabolic systems actually share previously unknown universal properties, and can be understood using tools from other academic fields. Metabolic processes are used in drug development, bioengineering, food production and other industries, so being able to predict how such systems will respond to change can offer many benefits.
Published Building a better forest tree with CRISPR gene editing
(via sciencedaily.com) Original source Researchers use CRISPR techniques to modify lignin levels in poplar trees.
Published Supercomputer used to simulate winds that cause clear air turbulence
(via sciencedaily.com) Using Japan's most powerful supercomputer, researchers reproduced cases of clear air turbulence around Tokyo. They simulated the fine vortices responsible for this dangerous phenomenon. The usefulness of the simulation in predicting turbulence was confirmed by comparing simulation data with data from aircraft recordings. This research should improve the forecasting of turbulence.
Published Researcher turns one of the basic rules of construction upside down
(via sciencedaily.com) Original source Structural engineers are familiar with seventeenth-century scientist Robert Hooke's theory that a hanging chain will mirror the shape of an upstanding rigid arch. However, new research now shows that this common-held belief is incorrect because, regardless of the similarities, the hanging chain and the arch are two incompatible mechanical systems.
Published Forest can adapt to climate change, but not quickly enough
(via sciencedaily.com) Original source America's forests have a tough time in store for them. Climate change is increasing temperatures and decreasing moisture levels across the country, not a winning combination for trees.
Published Study reveals how a tall spruce develops defense against hungry weevils
(via sciencedaily.com) Original source A study has identified genes involved in development of stone cells -- rigid cells that can block a nibbling insect from eating budding branches of the Sitka spruce evergreen tree. The insect's attack has stunted the growth of these forest giants.