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Categories: Biology: General, Environmental: Water

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Researchers have developed a deep-learning model, called PepFlow, that can predict all possible shapes of peptides -- chains of amino acids that are shorter than proteins, but perform similar biological functions. Peptides are known to be highly flexible, taking on a wide range of folding patterns, and are thus involved in many biological processes of interest to researchers in the development of therapeutics.

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The last population of woolly mammoths was isolated on Wrangel Island off the coast of Siberia 10,000 years ago, when sea levels rose and cut the mountainous island off from the mainland. A new genomic analysis reveals that the isolated mammoths, who lived on the island for the subsequent 6,000 years, originated from at most 8 individuals but grew to 200--300 individuals within 20 generations. The researchers report that the Wrangel Island mammoths' genomes showed signs of inbreeding and low genetic diversity but not to the extent that it can explain their ultimate (and mysterious) extinction.

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Most coral reef restoration efforts involve restocking reefs with nursery-grown corals. However, if these corals are of the same stock as their wild counterparts, they will be equally vulnerable to the heat stress that caused the bleaching event in the first place. Researchers discuss the potential of improving corals' chances by inducing the evolution of heat tolerance in their symbionts -- the mutualistic microbes that provide corals with nutrients in exchange for shelter and that are expelled during coral bleaching.

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During recent periods of unusually warm water in the Gulf of Alaska, young Pacific cod in near shore safe havens where they typically spend their adolescence did not experience the protective effects those areas typically provide, a new study found.

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In a rare opportunity to study carnivores before and after wolves were reintroduced to their ranges, researchers found that the effects of wolves on Isle Royale have been only temporary. And even in the least-visited national park, humans had a more significant impact on carnivores' lives.

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Ants might spread to new locations by stowing away on everyday vehicles. Previously, this was thought to occur mostly on agricultural equipment.

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The Supreme Court ruled last year that rivers that only flow in response to weather events -- called ephemeral streams -- do not fall under the protection of the Clean Water Act. New research suggests that this now leaves many U.S. waterways vulnerable to pollution.

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What happens when measles virus meets a human cell? The viral machinery unfolds in just the right way to reveal key pieces that let it fuse itself into the host cell membrane.

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Researchers have described some of the best-preserved three-dimensional trilobite fossils ever discovered. The fossils, which are more than 500 million years old, were collected in the High Atlas of Morocco and are being referred to by scientists as 'Pompeii' trilobites due to their remarkable preservation in ash.

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Researchers have studied the cell membranes of ctenophores ('comb jellies') and found they had unique lipid structures that allow them to live under intense pressure.

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Scientists have developed a gene-silencing tool that shows promise as a therapy against fatal prion diseases. The tool, a streamlined epigenetic editor, paves the way for a new class of genetic approaches to treat certain diseases.

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Synthetic biology combines principles from science, engineering and social science, creating emerging technologies such as alternative meats and mRNA vaccines; Deconstructing synthetic biology across scales gives rise to new approach to uniting traditional disciplines; Case studies offer a modular, accessible approach to teaching at different institutions.

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Why did multicellularity arise? Solving that mystery may help pinpoint life on other planets and explain the vast diversity and complexity seen on Earth today, from sea sponges to redwoods to human society. A new article shows how specific physical conditions -- especially ocean viscosity and resource deprivation -- during the global glaciation period known as Snowball Earth could have driven eukaryotes to turn multicellular.

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Older coastal cities, like Philadelphia, New York and Boston are at risk of being inundated by untreated sewage during floods. Due in part to the design of their combined sewer systems and in part due to sea level rise, these cities could be facing a growing public health crisis as climate change also drives more extreme precipitation. The group recently published research that modeled the potential extent of the problem in a section of the coastal city of Camden, New Jersey, and the effectiveness of one proposed intervention to help protect these communities.

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We often think of species as separate and distinct, but sometimes they can interbreed and create hybrids. When this happens consistently in a specific area, it forms what's known as a hybrid zone. These zones can be highly dynamic or remarkably stable, and studying them can reveal key insights into how species boundaries evolve -- or sometimes blur. Researchers now describe a hybrid zone between two manakin species in Panama that has overall remained relatively stable over the past 30 years.

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By using carbonated -- rather than still -- water during the concrete manufacturing process, a team of engineers has discovered a new way to store carbon dioxide (CO2) in the ubiquitous construction material.

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Researchers have directly measured cold, deep water upwelling via turbulent mixing along the slope of a submarine canyon in the Atlantic Ocean.

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Neuroscientists have discovered how the brain bidirectionally controls sensitivity to threats to initiate and complete escape behaviour in mice. These findings could help unlock new directions for discovering therapies for anxiety and post-traumatic stress disorder (PTSD).

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Although a fly's motor neurons are few, it performs remarkable aerial and terrestrial feats. A wiring diagram recently created of the motor circuits in the central nervous system of the fruit fly is providing detailed information on how the nerve coordination of leg movements differs from that controlling the wings. Such studies reveal the unexpected complexity of the fly's tiny motor system. They also advance the understanding of how the central nervous system in animals coordinates individual muscles to carry out a variety of behaviors.

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A genetic 'off switch' that shuts down the process in which legume plants convert atmospheric nitrogen into nutrients has been identified for the first time by a team of international scientists.