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Categories: Biology: Developmental, Geoscience: Geology
Published New tools reveal how genes work and cells organize
(via sciencedaily.com) Original source Researchers have discovered how certain proteins can attach to special structures in RNA, called G-quadruplexes. Additionally, they have developed computational tools capable of predicting these protein-RNA interactions. The newfound ability to predict these interactions can help future work in understanding molecular pathways in the cell and pave the way for developing drugs targeting these RNA G-quadruplex binding proteins, that are found to be involved in disease such as cancer.
Published New step in tectonic squeeze that turns seafloor into mountains
(via sciencedaily.com) Original source Researchers describe zircons from the Andes mountains of Patagonia. Although the zircons formed when tectonic plates were colliding, they have a chemical signature associated with when the plates were moving apart. The researchers think that the unexpected signature could be explained by the mechanics of underlying tectonic plates that hasn't yet been described in other models.
Published We've had bird evolution all wrong
(via sciencedaily.com) Original source Genomic anamolies dating back to the time of the dinosaurs misled scientists about the evolutionary history of birds.
Published When inequality is more than 'skin-deep': Social status leaves traces in the epigenome of spotted hyenas in Tanzania
(via sciencedaily.com) Original source A research consortium provides evidence that social behavior and social status are reflected at the molecular level of gene activation (epigenome) in juvenile and adult free-ranging spotted hyenas. They analyzed non-invasively collected gut epithelium samples from both high-ranking and low-ranking female hyenas and showed that rank differences were associated with epigenetic signatures of social inequality, i.e., the pattern of activation or switching off of genes that regulate important physiological processes such as energy conversion and immune response in several genome regions.
Published Cell division quality control 'stopwatch' uncovered
(via sciencedaily.com) Original source Biologists have uncovered a quality control timing mechanism tied to cell division. The 'stopwatch' function keeps track of mitosis and acts as a protective measure when the process takes too long, preventing the formation of cancerous cells.
Published Connecting the dots to shape growth forces
(via sciencedaily.com) Original source Branching patterns are prevalent in our natural environment and the human body, such as in the lungs and kidneys. For example, specific genes that express growth factor proteins are known to influence the development of the lungs' complex branches. Researchers have unveiled a regulatory system linking signal, force, and shape in mouse lung structure development. The team recognized that the signal protein ERK plays an active role in causing growing lung tissue to curve.
Published Old immune systems revitalized in mouse study, improving vaccine response
(via sciencedaily.com) Original source Those with aging immune systems struggle to fight off novel viruses and respond weakly to vaccination. Researchers were able to revitalize the immune system in mice.
Published GPT-4 for identifying cell types in single cells matches and sometimes outperforms expert methods
(via sciencedaily.com) Original source GPT-4 can accurately interpret types of cells important for the analysis of single-cell RNA sequencing -- a sequencing process fundamental to interpreting cell types -- with high consistency compared to that of time-consuming manual annotation by human experts of gene information.
Published New geological study: Scandinavia was born in Greenland
(via sciencedaily.com) Original source The oldest Scandinavian bedrock was 'born' in Greenland, according to a new geological study. The study helps us understand the origin of continents and why Earth is the only planet in our solar system with life.
Published As we age, our cells are less likely to express longer genes
(via sciencedaily.com) Original source Aging may be less about specific 'aging genes' and more about how long a gene is. Many of the changes associated with aging could be occurring due to decreased expression of long genes, say researchers. A decline in the expression of long genes with age has been observed in a wide range of animals, from worms to humans, in various human cell and tissue types, and also in individuals with neurodegenerative disease. Mouse experiments show that the phenomenon can be mitigated via known anti-aging factors, including dietary restriction.
Published Research finds a direct communication path between the lungs and the brain
(via sciencedaily.com) Original source New research finds a direct communication path between the lungs and the brain which may change the way we treat respiratory infections and chronic conditions. The lungs are using the same sensors and neurons in the pain pathway to let the brain know there's an infection. The brain then prompts the symptoms associated with sickness. Findings indicate we may have to treat the nervous system as well as the infection.
Published Decoding the Easter Bunny -- an eastern Finnish brown hare to represent the standard for the species' genome
(via sciencedaily.com) Original source Biologists have published a chromosomally assembled reference genome for the European brown hare. The genome consists of 2.9 billion base pairs, which form 23 autosomal chromosomes, and X and Y sex chromosomes. The timing of the genome release is very appropriate as the brown hare also represents the original Easter Bunny familiar from European folklore.
Published From the Mediterranean into the Atlantic: The Gibraltar arc is migrating to the west
(via sciencedaily.com) Original source Oceans are subject to continuous change, mostly over extremely vast periods of time running into millions of years. Researchers have now used computer simulations to demonstrate that a subduction zone originating in the Western Mediterranean will propagate into the Atlantic under the Strait of Gibraltar. According to their model, this will create a new Atlantic subduction zone 50 million years into the future, which will then move down into the Earth's mantle. The new geodynamic model explains the evolution of the Gibraltar subduction zone and its likely development, which will contribute to the renewal of the Atlantic Ocean floor.
Published Genes identified that allow bacteria to thrive despite toxic heavy metal in soil
(via sciencedaily.com) Original source Some soil bacteria can acquire sets of genes that enable them to pump the heavy metal nickel out of their systems, a study has found. This enables the bacteria to not only thrive in otherwise toxic soils but help plants grow there as well. A research team pinpointed a set of genes in wild soil bacteria that allows them to do this in serpentine soils which have naturally high concentrations of toxic nickel. The genetic discovery could help inform future bioremediation efforts that seek to return plants to polluted soils.
Published Harnessing hydrogen at life's origin
(via sciencedaily.com) Original source A new report uncovers how hydrogen gas, the energy of the future, provided energy in the past, at the origin of life 4 billion years ago. Hydrogen gas is clean fuel. It burns with oxygen in the air to provide energy with no CO2. Hydrogen is a key to sustainable energy for the future. Though humans are just now coming to realize the benefits of hydrogen gas (H2 in chemical shorthand), microbes have known that H2 is good fuel for as long as there has been life on Earth. Hydrogen is ancient energy.
Published How cells are ahead of the curve
(via sciencedaily.com) Original source The curvature of a surface determines the migration behavior of biological cells. They preferentially move along valleys or grooves while avoiding ridges. These findings gave rise to a model predicting cellular behavior. Such universal principles now allow a better understanding of the migration of immune and cancer cells, paving the way for new treatment options.
Published Even inactive smokers are densely colonized by microbial communities
(via sciencedaily.com) Original source Everything is everywhere -- under certain conditions microbial communities can grow and thrive, even in places that are seemingly uninhabitable. This is the case at inactive hydrothermal vents on the sea floor. An international team is presently working to accurately quantify how much inorganic carbon can be bound in these environments.
Published Machine learning classifier accelerates the development of cellular immunotherapies
(via sciencedaily.com) Original source Making a personalized T cell therapy for cancer patients currently takes at least six months. Scientists have shown that the laborious first step of identifying tumor-reactive T cell receptors for patients can be replaced with a machine learning classifier that halves this time.
Published New study on mating behaviors offers clues into the evolution of attraction
(via sciencedaily.com) Original source In examining the mating rituals of roundworms, researchers uncovered a unique approach to reproduction that maximizes genetic fitness.
Published Surprising insights about debris flows on Mars
(via sciencedaily.com) Original source The period that liquid water was present on the surface of Mars may have been shorter than previously thought. Channel landforms called gullies, previously thought to be formed exclusively by liquid water, can also be formed by the action of evaporating CO2 ice, according to a new study.