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Categories: Biology: Biotechnology, Mathematics: Modeling
Published Researchers customize AI tools for digital pathology



Scientists developed and tested new artificial intelligence (AI) tools tailored to digital pathology--a rapidly growing field that uses high-resolution digital images created from tissue samples to help diagnose disease and guide treatment.
Published Phage-derived enzyme targets E. faecalis biofilms to mitigate acute graft-versus-host disease



Acute graft-versus-host disease occurs when donor immune cells attack the recipient's tissues after an allogeneic hematopoietic stem cell transplantation (allo-HCT). Researchers recently identified a bacteriophage-derived enzyme called endolysin capable of targeting biofilms formed by Enterococcus faecalis. Their findings offer hope for tailored interventions in allo-HCT.
Published Discovery could help reduce adverse side effects of popular next-generation obesity medications



By teasing apart the therapeutic benefits from the adverse effects of new generation obesity medications, researchers found a population of neurons in the brain that controls food intake without causing nausea in an animal model.
Published Big gain in battle against harmful bacteria



An unexpected find has enabled important progress to be made in the battle against harmful bacteria.
Published The plague may have caused the downfall of the Stone Age farmers



Ancient DNA from bones and teeth hints at a role of the plague in Stone Age population collapse. Contrary to previous beliefs, the plague may have diminished Europe's populations long before the major plague outbreaks of the Middle Ages, new research shows.
Published Researchers introduce generative AI for databases



Researchers have developed an easy-to-use tool that enables someone to perform complicated statistical analyses on tabular data using just a few keystrokes. Their method combines probabilistic AI models with the programming language SQL to provide faster and more accurate results than other methods.
Published New one-step method to make multiple edits to a cell's genome



A team of scientists have developed a new method that enables them to make precise edits in multiple locations within a cell -- all at once. Using molecules called retrons, they created a tool that can efficiently modify DNA in bacteria, yeast, and human cells.
Published Ancient dingo DNA shows modern dingoes share little ancestry with modern dog breeds



A study of ancient dingo DNA revealed that the distribution of modern dingoes across Australia, including those on K'gari (formerly Fraser Island), pre-dates European colonization and interventions like the dingo-proof fence.
Published Innovative, highly accurate AI model can estimate lung function just by using chest x-rays



An artificial intelligence (AI) model that can estimate with high accuracy a person's lung function just by using a chest radiograph has been successfully developed.
Published New bio-based tool quickly detects concerning coronavirus variants



Researchers have developed a bioelectric device that can detect and classify new variants of coronavirus to identify those that are most harmful. It has the potential to do the same with other viruses, as well.
Published Genomic data integration improves prediction accuracy of apple fruit traits



Genotyping techniques can be used to select fruit trees with desired traits at the seedling stage, increasing the efficiency of fruit tree breeding. However, so far, there are multiple different genotyping systems, each generating distinct datasets. In a recent study, Japanese scientists revealed that integrating genomic data obtained with different genotyping systems can effectively combine with historical data, leveraging the accuracy of genomic predictions.
Published Visualizing short-lived intermediate compounds produced during chemical reactions



Immobilizing small synthetic molecules inside protein crystals proves to be a promising avenue for studying intermediate compounds formed during chemical reactions, scientists report. By integrating this method with time-resolved serial femtosecond crystallography, they successfully visualized reaction dynamics and rapid structural changes occurring within reaction centers immobilized inside protein crystals. This innovative strategy holds significant potential for the intelligent design of drugs, catalysts, and functional materials.
Published GeneMAP discovery platform will help define functions for 'orphan' metabolic proteins



Researchers have developed a discovery platform to probe the function of genes involved in metabolism -- the sum of all life-sustaining chemical reactions. The investigators used the new platform, called GeneMAP (Gene-Metabolite Association Prediction), to identify a gene necessary for mitochondrial choline transport.
Published Not so selfish after all: Viruses use freeloading genes as weapons



Certain pieces of DNA have been labeled as 'selfish genetic elements' due to notions that they don't contribute to a host organism's survival. Instead, researchers have now discovered that these elements have been weaponized and play a crucial role by cutting off a competitor's ability to reproduce.
Published Deep machine-learning speeds assessment of fruit fly heart aging and disease, a model for human disease



Drosophila -- known as fruit flies -- are a valuable model for human heart pathophysiology, including cardiac aging and cardiomyopathy. However, a choke point in evaluating fruit fly hearts is the need for human intervention to measure the heart at moments of its largest expansion or its greatest contraction to calculate cardiac dynamics. Researchers now show a way to significantly cut the time needed for that analysis while utilizing more of the heart region, using deep learning and high-speed video microscopy.
Published Never-before-seen view of gene transcription captured



New tech reveals findings that address long-standing theories about how bacteria begin the process of making RNA from DNA.
Published Do genes-in-pieces code for proteins that fold in pieces?



A new study offers new insights into the evolution of foldable proteins.
Published Researchers uncover key mechanisms in chromosome structure development



Researchers are making strides in understanding how chromosome structures change throughout the cell's life cycle.
Published Machine learning could aid efforts to answer long-standing astrophysical questions



Physicists have developed a computer program incorporating machine learning that could help identify blobs of plasma in outer space known as plasmoids. In a novel twist, the program has been trained using simulated data.
Published A new breakthrough in understanding regeneration in a marine worm



The sea worm Platynereis dumerilii is only a few centimeters long but has a remarkable ability: in just a few days, it can regenerate entire parts of its body after an injury or amputation. By focusing more specifically on the mechanisms at play in the regeneration of this worm's tail, a research team has observed that gut cells play a role in the regeneration of the intestine as well as other tissues such as muscle and epidermis.