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Categories: Biology: Cell Biology, Geoscience: Earthquakes
Published Doubling down on known protein families



A massive computational analysis of microbiome datasets has more than doubled the number of known protein families. This is the first time protein structures have been used to help characterize the vast array of microbial 'dark matter.'
Published Mummified feces reveals pre-Columbian cultures of the Caribbean consumed a diversity of plants



DNA analysis of mummified feces reveals two pre-Columbian Caribbean cultures ate a wide variety of plants, like maize, sweet potato, and peanuts -- and tobacco and cotton traces were detected too, according to a new study.
Published Evolutionary secrets of 'Old Tom' and the killer whales of Eden revealed by genetic study



Evolutionary biologists have for the first time decoded the genetic lineage of a famous killer whale and a pod that once worked alongside whale hunters off the coast of Australia. In the Australian tradition of claiming New Zealand's celebrities as its own, Old Tom, the leader of a pod of killer whales that famously helped whalers hunt baleen whales in the 20th century, has ancestral links to modern-day killer whales in New Zealand, according to new DNA research. Old Tom also shared a common ancestor with killer whales from Australasia, the North Pacific, and North Atlantic Oceans, but is most similar to modern New Zealand killer whales. However, most of Tom's DNA code is not found in other killer whales globally suggesting that the killer whales of Eden may have become extinct locally.
Published Death is only the beginning: Birds disperse eaten insects' eggs



Relationship patterns among flightless stick insects suggest that birds disperse the eggs after eating gravid females. Lab experiments previously suggested the possibility, but a new genetic analysis of natural populations in Japan now supports the idea.
Published How plant-derived nutrients can affect the gut and brain



Can plant-derived nutrients alter gut bacteria to affect brain function? Scientists investigated this question in a study of overweight adults. Their findings suggest that dietary fiber can exert influence on both the composition of gut bacteria and the reward signals in the brain and associated food decision-making.
Published Plate tectonic surprise: Geologist unexpectedly finds remnants of a lost mega-plate



Geologists have reconstructed a massive and previously unknown tectonic plate that was once one-quarter the size of the Pacific Ocean. The team had predicted its existence over 10 years ago based on fragments of old tectonic plates found deep in the Earth’s mantle. To the lead researchers surprise, she found that oceanic remnants on northern Borneo must have belonged to the long-suspected plate, which scientists have named Pontus. She has now reconstructed the entire plate in its full glory.
Published Newfound mechanism suggests drug combination could starve pancreatic cancer



A study found that a new combination of treatments safely decreased growth of pancreatic cancer in mice by preventing cancer cells from scavenging for fuel.
Published Epigenetic regulator MOF drives mitochondrial metabolism



Researchers have unveiled a new mechanism for regulating mitochondrial function. The findings reveal the critical role played by the enzymatic activity of the lysine acetyltransferase MOF in maintaining mitochondrial integrity and function through acetylation of mitochondrial electron transport chain component COX17. Cells lacking MOF-mediated COX17 acetylation exhibit dramatic mitochondrial defects and impaired ability to produce energy. Underscoring the clinical relevance of these findings, the team also showed that cells from human patients with a developmental disorder caused by mutations in MOF also exhibited respiratory defects that could be ameliorated by interventions such as acetylation-mimetic COX17 or mitochondrially targeted MOF.
Published Consistent metabolism may prove costly for insects in saltier water



Increased salinity usually spells trouble for freshwater insects like mayflies. A new study finds that the lack of metabolic responses to salinity may explain why some freshwater insects often struggle in higher salinity, while other freshwater invertebrates (like mollusks and crustaceans) thrive.
Published How male mosquitoes compensate for having only one X chromosome


Researchers have discovered the master regulator responsible for balancing the expression of X chromosome genes between males and females in the malaria mosquito. This discovery helps scientists better understand the evolution of the epigenetic mechanisms responsible for equalizing gene expression between the sexes. The findings may contribute to the development of new ways to prevent the spread of malaria.
Published Natural GM crops: Grasses take evolutionary shortcut by borrowing genes from their neighbors



Grass may transfer genes from their neighbors in the same way genetically modified crops are made, a new study has revealed.
Published New discovery may 'unlock' the future of infectious disease and cancer treatment



Researchers have identified a 'guard mechanism' for a protein which attacks microbes in infected cells, opening the possibility of new treatments for Toxoplasma, Chlamydia, Tuberculosis and even cancer.
Published The end of genes: Routine test reveals unique divergence in genetic code



Scientists testing a new method of sequencing single cells have unexpectedly changed our understanding of the rules of genetics. The genome of a protist has revealed a seemingly unique divergence in the DNA code signalling the end of a gene, suggesting the need for further research to better understand this group of diverse organisms.
Published AI-driven earthquake forecasting shows promise in trials



A new attempt to predict earthquakes has raised hopes that artificial intelligence could one day be used to limit earthquakes’ impact on lives and economies. The AI algorithm correctly predicted 70% of earthquakes a week before they happened during a seven-month trial in China. The system is limited because the AI needs an extensive database and years of seismic recordings to train itself on, but researchers said the effort is nonetheless a milestone for AI-driven earthquake forecasting. Researchers will soon begin testing the system at other locations.
Published Plants could worsen air pollution on a warming planet



New research shows that plants such as oak and poplar trees will emit more of a compound called isoprene as global temperatures climb. Isoprene from plants represents the highest flux of hydrocarbons to the atmosphere after methane. Although isoprene isn’t inherently bad — it actually helps plants better tolerate insect pests and high temperatures — it can worsen air pollution by reacting with nitrogen oxides from automobiles and coal-fired power plants. The new publication can help us better understand, predict and potentially mitigate the effects of increased isoprene emission as the planet warms.
Published Shining a light on tiny, solar-powered animals



Acoels have been found to host a wide diversity of symbiotic, photosynthetic microalgae.
Published New open-source method to improve decoding of single-cell data



Researchers have developed a new open-source computational method, dubbed Spectra, which improves the analysis of single-cell transcriptomic data. By guiding data analysis in a unique way, Spectra can offer new insights into the complex interplay between cells — like the interactions between cancer cells and immune cells, which are critical to improving immunotherapy treatments.
Published Ruffed grouse population more resilient than expected, genetic study finds



Despite decades of decline, a genetic analysis of ruffed grouse reveals that Pennsylvania's state bird harbors more genetic diversity and connectivity than expected. The findings suggest that the iconic game bird could be maintained in persistent numbers if appropriate protections are implemented.
Published Proteins roll the dice to determine bee sex



To date it has been unclear exactly how the sex of a bee is determined. A research team comprising biologists and chemists has now identified a key gene and the molecular mechanism linked with it. They describe how this process is similar to a game involving two dice.
Published New 'Assembly Theory' unifies physics and biology to explain evolution and complexity



An international team of researchers has developed a new theoretical framework that bridges physics and biology to provide a unified approach for understanding how complexity and evolution emerge in nature. This new work on 'Assembly Theory' represents a major advance in our fundamental comprehension of biological evolution and how it is governed by the physical laws of the universe.