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Categories: Biology: Cell Biology, Paleontology: Climate
Published Subalpine forests in the Northern Rockies are fire resilient--for now



Using lake sediment cores, scientists determined how these subalpine ecosystems recovered after 4,800 years of fire.
Published Critical step made for managing brushtail possums



Researchers say mapping the genetic code of the brushtail possum will benefit those working to both conserve and control the animal.
Published Art with DNA -- Digitally creating 16 million colors by chemistry



The DNA double helix is composed of two DNA molecules whose sequences are complementary to each other. The stability of the duplex can be fine-tuned in the lab by controlling the amount and location of imperfect complementary sequences. Fluorescent markers bound to one of the matching DNA strands make the duplex visible, and fluorescence intensity increases with increasing duplex stability. Now, researchers have succeeded in creating fluorescent duplexes that can generate any of 16 million colors -- a work that surpasses the previous 256 colors limitation. This very large palette can be used to 'paint' with DNA and to accurately reproduce any digital image on a miniature 2D surface with 24-bit color depth.
Published Unlocking secrets of immune system proteins: A potential path to new treatments



Using cryo-electron microscopy (cryo-EM), researchers captured unprecedented images of key immune system receptors interacting with messenger proteins, elucidating how the receptors change shape upon activation and transmit signals within the cell. The findings suggest new pathways for developing therapeutic molecules for diseases such as COVID-19, rheumatoid arthritis, neurodegenerative diseases and cancer.
Published Cocoa pods -- a source of chocolate, and potentially, flame retardants



As Halloween approaches, so too does the anticipation of a trick-or-treating stash filled with fun-sized chocolate candy bars. But to satisfy our collective craving for this indulgence, millions of cocoa pods are harvested annually. While the beans and pulp go to make chocolate, their husks are thrown away. Now, researchers show that cocoa pod husks could be a useful starting material for flame retardants.
Published Scientists discover the possible triggers for bacterial pathogens, opening the door for new treatment strategies



The legendary Alexander Fleming, who famously discovered penicillin, once said 'never to neglect an extraordinary appearance or happening.' And the path of science often leads to just that. New research is turning the page in our understanding of harmful bacteria and how they turn on certain genes, causing disease in our bodies.
Published Genomic analysis in snakes shows link between neutral, functional genetic diversity



In the world of threatened and endangered species conservation, the genomic revolution has raised some complicated questions: How can scientists justify assessing species genetic diversity without consulting entire genomes now that they can be sequenced? But then again, how can scientists justify the time and expense of genome sequencing when age-old measures of neutral genetic diversity are much cheaper and easier to obtain? A new study suggests making a transition from 'old school' genetics to 'new school' genomics for species conservation purposes probably isn't necessary in all cases.
Published Fungal infection in the brain produces changes like those seen in Alzheimer's disease



Researchers have discovered how the fungus Candida albicans enters the brain, activates two separate mechanisms in brain cells that promote its clearance, and, important for the understanding of Alzheimer's disease development, generates amyloid beta (Ab)-like peptides, toxic protein fragments from the amyloid precursor protein that are considered to be at the center of the development of Alzheimer's disease.
Published Ice sheet surface melt is accelerating in Greenland and slowing in Antarctica



Surface ice in Greenland has been melting at an increasing rate in recent decades, while the trend in Antarctica has moved in the opposite direction, according to researchers.
Published Can't stop binging on fries and BBQ?



People overeat and become overweight for a variety of reasons. The fact that flavorful high-calorie food is often available nearly everywhere at any time doesn't help. Researchers have determined for the first time why certain chemicals in cooked or processed foods, called advanced glycation end products, or AGEs, increase hunger and test our willpower or ability to make healthy choices when it comes to food.
Published The deep slumber of a hospital pathogen: Why infections with Acinetobacter baumannii can flare up again and again



A research team has discovered a fundamental mechanism that helps the dreaded hospital pathogen Acinetobacter baumannii to survive. This mechanism explains why the pathogen is difficult to eradicate in hospitals and why infections flare up again and again in patients: When living conditions become too unfavorable for the bacteria, they fall into a kind of slumber. In this state, conventional diagnostic methods can no longer detect them nor is it possible to kill them off. When living conditions improve again, they awaken from this 'deep sleep'.
Published Peering inside cells to see how they respond to stress



The heat shock response of cells is a classic model of biological adaptation, part of the fundamental processes of life -- conserved in creatures from single-celled yeast to humans -- that allow our cells to adjust to changing conditions in their environment. For years, scientists have focused on how different genes respond to heat stress to understand this survival technique. Now, thanks to the innovative use of advanced imaging techniques, researchers are getting an unprecedented look at the inner machinery of cells to see how they respond to heat stress.
Published Climate change coping mechanism discovered in humble algae



One of the building blocks of ocean life can adapt to cope with the effects of climate change, according to new research. The discovery holds promises for biotechnology developments that could counter the negative effects of changing environmental conditions, such as ocean warming and even the reduction in the productivity of crops.
Published Fecal microbe transplants: B. vulgatus genes that correlate with early colonization



Fecal microbe transplants from healthy donors can treat patients with recurrent Clostridium difficile infections. However, after tens of thousands transplants, little was known about which donor strains provide long-term engraftment, and which engraft early after the transplant. Most failures of fecal microbe transplantation occur in the first four weeks. Researchers have now found 19 Bacteroides vulgatus genes that were unique to three strains that show early engraftment in patients after a fecal transplant, as opposed to seven strains that did not show early engraftment.
Published 200-year-old DNA helps map tiny fly's genetic course to new lands, modern times



Researchers have extracted and analyzed DNA from fruit flies housed in museum collections in Lund, Stockholm and Copenhagen. Surprisingly, the researchers found the fruit flies collected in Sweden in the early 1800s were more genetically similar to 21st century flies than the Swedish samples from the 1930s.
Published Over 40 percent of Antarctica's ice shelves reduced in volume over 25 years



71 of the 162 ice shelves that surround Antarctica have reduced in volume over 25 years from 1997 to 2021, with a net release of 7.5 trillion tons of meltwater into the oceans, say scientists. They found that almost all the ice shelves on the western side of Antarctica experienced ice loss. In contrast, most of the ice shelves on the eastern side stayed the same or increased in volume. Over the 25 years, the scientists calculated almost 67 trillion tonnes of ice was exported to the ocean, which was offset by 59 trillion tons of ice being added to the ice shelves, giving a net loss of 7.5 trillion tons.
Published Scientists generate first single-cell 'atlas' of the primate brain to help explore links between molecules, cells, brain function and disease



As part of the effort to better understand the evolution of the brains in people and animals, a research team has generated the world's largest primate brain-wide atlas.
Published Scientists unveil detailed cell maps of the human brain and the nonhuman primate brain



A group of international scientists have mapped the genetic, cellular, and structural makeup of the human brain and the nonhuman primate brain. This understanding of brain structure allows for a deeper knowledge of the cellular basis of brain function and dysfunction, helping pave the way for a new generation of precision therapeutics for people with mental disorders and other disorders of the brain.
Published Engineered bacteria paint targets on tumors for cancer-killing T cells to see



Synthetic biologists report on a new approach to attacking tumors. They have engineered tumor-colonizing bacteria (probiotics) to produce synthetic targets in tumors that direct CAR-T cells to destroy the newly highlighted cancer cells.
Published Honey bees may inherit altruistic behavior from their mothers



True altruism is rare behavior in animals, but a new study has found that honey bees display this trait. Additionally, they found that an evolutionary battle of genetics may determine the parent they inherit it from.