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Categories: Biology: Genetics, Ecology: Trees
Published Hundreds of new genome sequences fill gaps in the fruit fly tree of life
(via sciencedaily.com) Original source A multitude of new genomic sequence data fills major gaps in the fruit fly tree of life, researchers report.
Published Small animals acquire genes from bacteria that can produce antibiotics
(via sciencedaily.com) Original source A group of small, freshwater animals (bdelloid rotifers) protect themselves from infections using antibiotic recipes 'stolen' from bacteria, according to new research. This raises the potential that rotifers are producing novel antimicrobials that may be less toxic to animals, including humans, than those we develop from bacteria and fungi.
Published Secrets behind viral precision
(via sciencedaily.com) Original source New research is shedding light on how viruses ensure their survival by precisely timing the release of new viruses. The discovery offers a new theoretical framework for understanding these dynamic biological phenomena.
Published Ancient viruses fuel modern-day cancers
(via sciencedaily.com) Original source The human genome is filled with flecks of DNA left behind by viruses that infected primate ancestors tens of millions of years ago. Scientists used to think they were harmless, but new research shows that, when reawakened, they help cancer survive and thrive.
Published Discovery of a hybrid lineage offers clues to how trees adapt to climate change
(via sciencedaily.com) Original source The discovery of a hybrid population of poplar trees in western Wyoming has provided insight into how natural hybridization informs the evolution of many plant species, according to researchers. They also said their discovery suggests that genetic exchange between species may be critical for adaptation to environmental change.
Published Paleolithic diets are not without risks
(via sciencedaily.com) Original source High-protein diets, known as 'Paleolithic diets', are popular. Using mouse models, scientists have studied their impact. While effective in regulating weight and stabilizing diabetes, these diets are not without risks. Excess protein greatly increases ammonium production, overwhelming the liver. Excess ammonium can cause neurological disorders and, in severe cases, lead to coma. These results suggest caution when following these diets.
Published Forests endure as carbon sink despite regional pressures
(via sciencedaily.com) Original source Despite facing regional threats like deforestation and wildfires, the world's forests continue to be a powerful weapon in the fight against climate change. A new study reveals these vital ecosystems have consistently absorbed carbon dioxide for the past three decades, even as disruptions chip away at their capacity. The study, based on long-term ground measurements combined with remote sensing data, found that forests take up an average of 3.5 0.4 billion metric tons of carbon per year, which is nearly half of the carbon dioxide emissions from burning fossil fuels between 1990 and 2019.
Published Logged forests can still have ecological value -- if not pushed too far
(via sciencedaily.com) Original source Researchers have analysed data from 127 studies to reveal 'thresholds' for when logged rainforests lose the ability to sustain themselves. The results could widen the scope of which forests are considered 'worth' conserving, but also show how much logging degrades forests beyond the point of no return.
Published Genome recording makes living cells their own historians
(via sciencedaily.com) Original source Genomes can now be used to store information about a variety of transient biological events inside of living cells, as they happen, like a flight recorder collecting data from an aircraft. The method, called ENGRAM, aims to turn cells into their own historians. ENGRAM couples each kind of biological signal or event inside a cell to a symbolic barcode. This new strategy traces and archives the type and timing of biological signals inside the cell by inserting this information into the genome. For example, this record-keeping can track the commands that turn genes on or off.
Published Influenza viruses can use two ways to infect cells
(via sciencedaily.com) Original source Most influenza viruses enter human or animal cells through specific pathways on the cells' surface. Researchers have now discovered that certain human flu viruses and avian flu viruses can also use a second entry pathway, a protein complex of the immune system, to infect cells. This ability helps the viruses infect different species -- and potentially jump between animals and humans.
Published A new addition to the CRISPR toolbox: Teaching the gene scissors to detect RNA
(via sciencedaily.com) Original source CRISPR-Cas systems, defense systems in bacteria, have become a plentiful source of technologies for molecular diagnostics. Researchers have now expanded this extensive toolbox further. Their novel method, called PUMA, enables the detection of RNA with Cas12 nucleases, which naturally target DNA. PUMA promises a wide range of applications and high accuracy.
Published Scientists use machine learning to predict diversity of tree species in forests
(via sciencedaily.com) Original source Researchers used machine learning to generate highly detailed maps of over 100 million individual trees from 24 sites across the U.S. These maps provide information about individual tree species and conditions, which can greatly aid conservation efforts and other ecological projects.
Published Unique characteristics of previously unexplored protein discovered
(via sciencedaily.com) Original source Research achieves scientific breakthrough in understanding cell division.
Published Immune system in the spotlight
(via sciencedaily.com) Original source Our immune system is always on alert, detecting and eliminating pathogens and cancer cells. Cellular control mechanisms cause diseased cells to present antigens on their surface like signs for the immune system. For analysis of the necessary complex antigen processing and transport processes in real time, researchers have developed a 'cage' that is opened with light to release trapped antigens at a specific place and time.
Published Ancient microbes offer clues to how complex life evolved
(via sciencedaily.com) Original source Researchers have discovered that a single-celled organism, a close relative of animals, harbors the remnants of ancient giant viruses woven into its own genetic code. This finding sheds light on how complex organisms may have acquired some of their genes and highlights the dynamic interplay between viruses and their hosts.
Published E. coli variant may cause antimicrobial resistance in dogs, humans
(via sciencedaily.com) Original source Researchers studying antimicrobial-resistant E. coli -- the leading cause of human death due to antimicrobial resistance worldwide -- have identified a mechanism in dogs that may render multiple antibiotic classes ineffective.
Published Building a roadmap to bioengineer plants that produce their own nitrogen fertilizer
(via sciencedaily.com) Original source Nitrogen fertilizers make it possible to feed the world's growing population, but they are also costly adn harm ecosystems. However, a few plants have evolved the ability to acquire their own nitrogen with the help of bacteria, and a new study helps explain how they did it, not once, but multiple times.
Published Wildfire smoke has a silver lining: It can help protect vulnerable tree seedlings
(via sciencedaily.com) Original source Forest scientists studying tree regeneration have found that wildfire smoke comes with an unexpected benefit: It has a cooling capacity that can make life easier for vulnerable seedlings.
Published Big boost for new epigenetics paradigm: CoRSIVs, first discovered in humans, now found in cattle
(via sciencedaily.com) Original source A study opens new possibilities to improve production efficiency in the cattle industry and potentially animal agriculture more broadly.
Published Study examines urban forests across the United States
(via sciencedaily.com) Original source Tree-planting campaigns have been underway in the United States, especially in cities, as part of climate mitigation efforts given the many environmental benefits of urban forests. But a new study finds that some areas within urban forests in the U.S., may be more capable than trees growing around city home lawns in adapting to a warmer climate.