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Categories: Biology: Molecular, Ecology: Sea Life

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The Atlantic surfclam, an economically valuable species that is the main ingredient in clam chowder and fried clam strips, has returned to Virginia waters in a big way, reversing a die-off that started more than two decades ago. In a comprehensive study of surfclams collected from an area about 45 miles due east from the mouth of the Chesapeake Bay, scientists found the population to be thriving and growing.

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Researchers have revealed the regulatory mechanism of a specific protein, TRBP, that plays a key role in balancing the immune response triggered by viral infections in mammal cells. These findings could help drive the development of antiviral therapies and nucleic acid medicines to treat genetic disorders.

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Researchers used acoustic telemetry to tag and track coho on their journey.

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Observing proteins precisely within cells is extremely important for many branches of research but has been a significant technical challenge -- especially in living cells, as the required fluorescent labeling had to be individually attached to each protein. The research group has now overcome this hurdle: With a method called 'vpCells,' it is possible to label many proteins simultaneously, using five different fluorescent colors.

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A heart attack will leave a permanent scar on a human heart, yet other animals, including zebrafish, can clear cardiac scar tissue and regrow damaged muscle as adults. Biologists sheds new light on how zebrafish heal heart tissue by comparing how this species responds to heart injury with medaka, a fish species that cannot regenerate cardiac tissue.

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The 2010 Gulf of Mexico Deepwater Horizon oil spill, the largest accidental spill in history, released almost 100 million gallons of oil, causing significant pollution. A decade later, its long-term effects remain unclear. A study investigating the impact on endemic fish species found 29 of 78 species unreported in museum collections since the spill, suggesting potential loss of biodiversity.

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Animal and plant populations have been extensively studied, which has helped to understand ecosystem processes and evolutionary adaptations. However, this has not been the case with microbial populations due to the impossibility of isolating, culturing and analyzing the genetic content of the different species and their individuals in the laboratory. Therefore, although it is known that populations of microorganisms include a great diversity, this remains largely uncharacterized.

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The origin of life continues to remain a matter of debate. The ribonucleic acid (RNA) world hypothesis proposes that 'ribozymes' which store genetic information and possess catalytic functions may have supported the activities of early life forms. Now, researchers explore how RNA elongation is regulated allosterically, shedding light on its impact on early life processes and offering insights into the fabrication of arbitrary RNA nanostructures with various modern applications.

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Researchers have found that over the last 120 years, the porosity -- or small-scale holes -- in mussel shells along the East Coast of the United States has increased, potentially due to warming waters. The study analyzed modern mussel shells in comparison to specimens in the Museum's historic collection.

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Trying to hit a target size before dividing seems like the best strategy for maintaining a precise cell size, but bacteria don't do that. Now we know why.

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Marine communities migrated to Antarctica during the Earth's warmest period in 66 million years long before a mass-extinction event.

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Using a pair of sensors made from carbon nanotubes, researchers discovered signals that help plants respond to stresses such as heat, light, or attack from insects or bacteria. Farmers could use these sensors to monitor threats to their crops, allowing them to intervene before the crops are lost.

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Researchers have developed a powerful, new technique to generate 'movies' of changing protein structures and speeds of up to 50 frames per second.

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Researchers have discovered a DNA repair mechanism that advances understanding of how human cells stay healthy, and which could lead to new treatments for cancer and premature aging.

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A new study shows that ocean acidification is changing the mix of microbes in coral reef systems, which can be used to assess ecosystem health.

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Researchers who created 'family trees' for nearly 10,000 fish found that first-generation, wild-born descendants of hatchery-origin Chinook salmon in an Oregon river show improved fitness.

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A massive new analysis of high seas salmon surveys is enhancing the understanding of salmon ecology, adding details about where various species congregate in the North Pacific Ocean and their different temperature tolerances. The project integrates numerous international salmon studies from the North Pacific dating back to the 1950s.

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Tagging marine animals with sensors to track their movements and ocean conditions can provide important environmental and behavioral information. Existing techniques to attach sensors currently largely rely on invasive physical anchors, suction cups, and rigid glues. While these techniques can be effective for tracking marine animals with hard exoskeletons and large animals such as sharks, individuals can incur physiological and metabolic stress during the tagging process, which can affect the quality of data collection. A newly developed soft hydrogel-based bioadhesive interface for marine sensors, referred to as BIMS, holds promise as an effective, rapid, robust, and non-invasive method to tag and track all sorts of marine species, including soft and fragile species. The BIMS tagging, which is also simple and versatile, can help researchers better understand animal behavior while also capturing oceanographic data critical for helping to better understand some impacts of climate change and for resource management.

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High levels of plastic pollution can kill the embryos of a wide range of ocean animals, new research shows.

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A research team discovers previously unknown gene that indirectly promotes photosynthesis Protein regulator NirP1 influences the coordination of the nitrogen and carbohydrate metabolism 'Such protein regulators could in future be deployed in 'green' and 'blue' biotechnology for targeted control of the metabolism,' says geneticist.