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Categories: Biology: Marine, Mathematics: Modeling
Published Long-standing marine mystery solved: How algae get nitrogen to grow
(via sciencedaily.com) Original source Scientists shed light on an unexpected partnership: A marine diatom and a bacterium that can account for a large share of nitrogen fixation in vast regions of the ocean. This symbiosis likely plays a key role for global marine nitrogen fixation and productivity, and thus uptake of carbon dioxide. The newly-discovered bacterial symbiont is closely related to the nitrogen-fixing Rhizobia which live in partnership with many crop plants and may also open up new avenues for engineering nitrogen-fixing plants.
Published New deep-learning model outperforms Google AI system in predicting peptide structures
(via sciencedaily.com) Original source Researchers have developed a deep-learning model, called PepFlow, that can predict all possible shapes of peptides -- chains of amino acids that are shorter than proteins, but perform similar biological functions. Peptides are known to be highly flexible, taking on a wide range of folding patterns, and are thus involved in many biological processes of interest to researchers in the development of therapeutics.
Published To protect corals from summer heatwaves, we should help their microbial symbionts evolve heat tolerance in the lab
(via sciencedaily.com) Original source Most coral reef restoration efforts involve restocking reefs with nursery-grown corals. However, if these corals are of the same stock as their wild counterparts, they will be equally vulnerable to the heat stress that caused the bleaching event in the first place. Researchers discuss the potential of improving corals' chances by inducing the evolution of heat tolerance in their symbionts -- the mutualistic microbes that provide corals with nutrients in exchange for shelter and that are expelled during coral bleaching.
Published Pacific cod can't rely on coastal safe havens for protection during marine heat waves
(via sciencedaily.com) Original source During recent periods of unusually warm water in the Gulf of Alaska, young Pacific cod in near shore safe havens where they typically spend their adolescence did not experience the protective effects those areas typically provide, a new study found.
Published Prehistoric 'Pompeii' discovered: Most pristine trilobite fossils ever found shake up scientific understanding of the long extinct group
(via sciencedaily.com) Original source Researchers have described some of the best-preserved three-dimensional trilobite fossils ever discovered. The fossils, which are more than 500 million years old, were collected in the High Atlas of Morocco and are being referred to by scientists as 'Pompeii' trilobites due to their remarkable preservation in ash.
Published Under pressure: How comb jellies have adapted to life at the bottom of the ocean
(via sciencedaily.com) Original source Researchers have studied the cell membranes of ctenophores ('comb jellies') and found they had unique lipid structures that allow them to live under intense pressure.
Published Why the harsh Snowball Earth kick-started our earliest multicellular ancestors
(via sciencedaily.com) Original source Why did multicellularity arise? Solving that mystery may help pinpoint life on other planets and explain the vast diversity and complexity seen on Earth today, from sea sponges to redwoods to human society. A new article shows how specific physical conditions -- especially ocean viscosity and resource deprivation -- during the global glaciation period known as Snowball Earth could have driven eukaryotes to turn multicellular.
Published Future risk of coral bleaching set to intensify globally
(via sciencedaily.com) Original source Researchers have projected future marine heatwaves will cause coral reefs to be at severe risk of bleaching for longer periods than previously seen.
Published Ocean's loss of oxygen caused massive Jurassic extinction: Could it happen again?
(via sciencedaily.com) Original source Researchers have found a chemical clue in Italian limestone that explains a mass extinction of marine life in the Early Jurassic period, 183 million years ago. Volcanic activity pumped out CO2, warming oceans and lowering their oxygen levels. The findings may foretell the impact climate change and oxygen depletion might have on today's oceans.
Published Plankton researchers urge their colleagues to mix it up
(via sciencedaily.com) Original source A new article encourages researchers to focus their attention on mixoplankton, providing a set of methodologies to help expand our understanding of this critically important component of the marine ecosystem.
Published Prying open the AI black box
(via sciencedaily.com) Original source Meet SQUID, a new computational tool. Compared with other genomic AI models, SQUID is more consistent, reduces background noise, and can yield better predictions regarding critical mutations. The new system aims to bring scientists closer to their findings' true medical implications.
Published Unifying behavioral analysis through animal foundation models
(via sciencedaily.com) Original source Behavioral analysis can provide a lot of information about the health status or motivations of a living being. A new technology makes it possible for a single deep learning model to detect animal motion across many species and environments. This 'foundational model', called SuperAnimal, can be used for animal conservation, biomedicine, and neuroscience research.
Published Can AI learn like us?
(via sciencedaily.com) Original source Scientists have developed a new, more energy-efficient way for AI algorithms to process data. His model may become the basis for a new generation of AI that learns like we do. Notably, these findings may also lend support to neuroscience theories surrounding memory's role in learning.
Published Restored rat-free islands could support hundreds of thousands more breeding seabirds
(via sciencedaily.com) Original source Archipelago case-study shows that removing invasive rats and restoring native vegetation could help bring back hundreds of thousands of breeding pairs of seabirds lost to tropical islands. Calculating that there are enough fish to sustain restored seabird populations should be an important consideration for restoration projects, scientists say. Restored seabird populations also provide huge boost to the health of surrounding coral reef ecosystems through restored nutrient cycles.
Published New study shows mechanisms of Hagfish burrowing into deep sea sediment
(via sciencedaily.com) Original source Scientists have developed a novel way to observe the elusive burrowing behavior of hagfish. Scientists created a specialized tank of transparent gelatin in order to visualize how the hagfish behave and locomote within sediments.
Published Simplicity versus adaptability: Understanding the balance between habitual and goal-directed behaviors
(via sciencedaily.com) Original source Scientists have proposed a new AI method in which systems of habitual and goal-directed behaviors learn to help each other. Through computer simulations that mimicked the exploration of a maze, the method quickly adapts to changing environments and also reproduced the behavior of humans and animals after they had been accustomed to a certain environment for a long time. The study not only paves the way for the development of systems that adapt quickly and reliably in the burgeoning field of AI, but also provides clues to how we make decisions in the fields of neuroscience and psychology.
Published Custom-made molecules designed to be invisible while absorbing near-infrared light
(via sciencedaily.com) Original source Researchers used theoretical calculations assessing electron orbital symmetry to synthesize new molecule designed to be both transparent and colorless while absorbing near-infrared light. This compound demonstrates the first systematic approach to producing such materials and have applications in advanced electronics. This compound also shows semiconducting properties.
Published Previously uncharacterized parasite uncovered in fish worldwide
(via sciencedaily.com) Original source Using genome reconstruction, scientists unveiled a once 'invisible' fish parasite present in many marine fish world-wide that belongs to the apicomplexans, one of the most important groups of parasites at a clinical level. However, it had gone unnoticed in previous studies. The parasite is geographically and taxonomically widespread in fish species around the planet, with implications for commercial fishing and oceanic food webs.
Published Ancient polar sea reptile fossil is oldest ever found in Southern Hemisphere
(via sciencedaily.com) Original source An international team of scientists has identified the oldest fossil of a sea-going reptile from the Southern Hemisphere -- a nothosaur vertebra found on New Zealand's South Island. 246 million years ago, at the beginning of the Age of Dinosaurs, New Zealand was located on the southern polar coast of a vast super-ocean called Panthalassa. 'The nothosaur found in New Zealand is over 40 million years older than the previously oldest known sauropterygian fossils from the Southern Hemisphere.
Published Researchers use large language models to help robots navigate
(via sciencedaily.com) Original source A technique can plan a trajectory for a robot using only language-based inputs. While it can't outperform vision-based approaches, it could be useful in settings that lack visual data to use for training.