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Categories: Biology: Microbiology, Ecology: Endangered Species
Published Computable species descriptions: Scientists develop a new computer language to model organismal traits
(via sciencedaily.com) Original source Understanding organismal traits and learning how they evolve and adapt to different environments is crucial for biologists and the battle against biodiversity loss. To be truly efficient, however, the researchers need to use huge amounts of data, including physical traits and DNA. Furthermore, those different data types need to be accurately linked to each other, so that computers and next-age AI technology can correctly process it. Currently, this process of accurate linking is extremely difficult and largely inefficient. To solve this problem, researchers created a brand new computer language called Phenoscript.
Published Previously uncharacterized parasite uncovered in fish worldwide
(via sciencedaily.com) Original source Using genome reconstruction, scientists unveiled a once 'invisible' fish parasite present in many marine fish world-wide that belongs to the apicomplexans, one of the most important groups of parasites at a clinical level. However, it had gone unnoticed in previous studies. The parasite is geographically and taxonomically widespread in fish species around the planet, with implications for commercial fishing and oceanic food webs.
Published AI shows how field crops develop
(via sciencedaily.com) Original source Researchers developed software that can simulate the growth of field crops. To do this, they fed thousands of photos from field experiments into a learning algorithm. This enabled the algorithm to learn how to visualize the future development of cultivated plants based on a single initial image. Using the images created during this process, parameters such as leaf area or yield can be estimated accurately.
Published When bacteria are buckling
(via sciencedaily.com) Original source Filamentous cyanobacteria buckle at a certain length when they encounter an obstacle. The results provide an important basis for the use of cyanobacteria in modern biotechnology.
Published A new weapon in the battle against antibiotic resistance: Temperature
(via sciencedaily.com) Original source Scientists have shown in laboratory experiments that an increase in temperature from 37 to 40 degrees Celsius increased the resistance rate for two antimicrobials, while for a third antimicrobial, the higher temperature reduced the resistance rate. If these results can be replicated in human patients, fever control could be a new way to mitigate the emergence of antibiotic resistance.
Published The genetic 'switches' of bone growth
(via sciencedaily.com) Original source In mammals, only 3% of the genome consists of coding genes which, when transcribed into proteins, ensure the biological functions of the organism and the in-utero development of future individuals. But genes do not function alone. They are controlled by other sequences in the genome, called enhancers, which, like switches, activate or deactivate them as required. A team has now identified and located 2700 enhancers -- among millions of non-coding genetic sequences -- that precisely regulate the genes responsible for bone growth. This discovery sheds light on one of the major factors influencing the size of individuals in adulthood, and explains why their failure could be the cause of certain bone malformations.
Published Infectious H5N1 influenza virus in raw milk rapidly declines with heat treatment
(via sciencedaily.com) Original source The amount of infectious H5N1 influenza viruses in raw milk rapidly declined with heat treatment in laboratory research. However, small, detectable amounts of infectious virus remained in raw milk samples with high virus levels when treated at 72 degrees Celsius (161.6 degrees Fahrenheit) for 15 seconds -- one of the standard pasteurization methods used by the dairy industry. The authors of the study stress, however, that their findings reflect experimental conditions in a laboratory setting and are not identical to large-scale industrial pasteurization processes for raw milk.
Published Can engineered plants help make baby formula as nutritious as breast milk?
(via sciencedaily.com) Original source New research may help close the nutrition gap between infant formula and human breast milk. The study shows how plants can be programmed to produce a diverse array of beneficial sugars found in human breast milk. The findings could lead to healthier and more affordable formula for babies, or more nutritious non-dairy plant milk for adults.
Published Modifying genomes of tardigrades to unravel their secrets
(via sciencedaily.com) Original source Some species of tardigrades are highly and unusually resilient to various extreme conditions fatal to most other forms of life. The genetic basis for these exceptional abilities remains elusive. Researchers have now successfully edited genes using the CRISPR technique in a highly resilient tardigrade species previously impossible to study with genome-editing tools. The successful delivery of CRISPR to an asexual tardigrade species directly produces gene-edited offspring. The design and editing of specific tardigrade genes allow researchers to investigate which are responsible for tardigrade resilience and how such resilience can work.
Published The scary, yet promising world of phages, the pathogen's pathogen
(via sciencedaily.com) Original source Researchers are unlocking the mystery of how bacteria harness viruses to wipe out the competition. The answers could help spur the development of alternatives to antibiotics.
Published Ingestible microbiome sampling pill technology advances
(via sciencedaily.com) Original source Significant progress has been made in the development of a small device, about the size of a vitamin pill, that can be swallowed and passed through the gastrointestinal tract to sample and help identify the full inventory of microbiome bacteria in an individual.
Published Scientists adapt astronomy method to unblur microscopy images
(via sciencedaily.com) Original source Researchers have adapted a class of techniques employed in astronomy to unblur images of far-away galaxies for use in the life sciences, providing biologists with a faster and cheaper way to get clearer and sharper microscopy images.
Published Humans are the elephant in the room where conservation is debated
(via sciencedaily.com) Original source Studies working to map conservation historically have left humans out of the equation. This study proposes ways to build in the outsized footprint created by people in wild places.
Published Are plants intelligent? It depends on the definition
(via sciencedaily.com) Original source Goldenrod can perceive other plants nearby without ever touching them, by sensing far-red light ratios reflected off leaves. When goldenrod is eaten by herbivores, it adapts its response based on whether or not another plant is nearby. Is this kind of flexible, real-time, adaptive response a sign of intelligence in plants?
Published Nasal microbiota is potential diagnostic biomarker for sepsis
(via sciencedaily.com) Original source A new study shows that analyzing nasal microbiota outperforms gut microbiota analysis to predict sepsis in the ICU.
Published Study shows role of fathers in seeding the microbiota of newborns and confirms benefits of maternal fecal microbiota transplants
(via sciencedaily.com) Original source A mother's contribution to the makeup of a newborn baby's microbiota has been well documented. Now a new article shows the important contributions that fathers make to the composition of microorganisms colonizing a baby's gut as well. Furthermore, the study confirmed that maternal fecal microbiota transfer (FMT) in babies born by caesarean section can help to correct the microbiota disturbances often observed in babies who are not born vaginally.
Published New technique reveals earliest signs of genetic mutations
(via sciencedaily.com) Original source Mutations are changes in the molecular 'letters' that make up the DNA code, the blueprint for all living cells. Some of these changes can have little effect, but others can lead to diseases, including cancer. Now, a new study introduces an original technique, called HiDEF-seq, that can accurately detect the early molecular changes in DNA code that precede mutations.
Published Origin and spread of malaria
(via sciencedaily.com) Original source Researchers have reconstructed the evolutionary history and global spread of malaria over the past 5,500 years, identifying trade, warfare, and colonialism as major catalysts for its dispersal.
Published Scientists engineer yellow-seeded camelina with high oil output
(via sciencedaily.com) Original source Using tools of modern genetics, plant biochemists have produced a new high-yielding oilseed crop variety -- a yellow-seeded variety of Camelina sativa, a close relative of canola, that accumulates 21.4% more oil than ordinary camelina.
Published Specialist and migratory birds at greater risk under climate change
(via sciencedaily.com) Original source Following decades of decline, even fewer birds will darken North American skies by the end of the century, according to a new analysis. The study examines the long-term effects of climate change on the abundance and diversity of bird groups across the continent as a whole while accounting for additional factors that put birds at risk.